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Table 5 Filtering quality (aligned sequences))

From: Fast estimation of genetic relatedness between members of heterogeneous populations of closely related genomic variants

Test

Pairs in output

Pairs that passed filtering

Filtering PPV

d1

60 420

64 573

0.9357

d2

379 233

385 646

0.9834

d3

1 800 448

1 862 914

0.9665

d4

5 845 274

6 204 049

0.9422

d5

18 551 359

20 706 813

0.8959

d6

38 792 420

44 939 957

0.8632

d7

155 201 680

179 791 828

0.8632

d8

620 870 720

719 231 312

0.8632

m1

47 101 270

48 888 011

0.9635