Table 3 Comparison between protein and peptide characteristics of 2JF9 and 4IV2
From: Propedia: a database for protein–peptide identification based on a hybrid clustering algorithm
4IV2–C–A | 2JF9–Q–B | ||
|---|---|---|---|
Protein | |||
Chain | A | B | |
Length | 232 | 210 | |
Binding area (Å2) | 484.85 | 519.30 | |
Peptide | |||
Chain | C | Q | |
Length | 10 | 13 | |
Binding area (Å2) | 559.07 | 547.74 | |
Hydrophobic (% a.a.) | 40% | 30% | |
Molecular weight | 1272.50 | 1539.71 | |
Aromaticity | 0.00 | 0.15 | |
Instability index | 95.31 | 34.72 | |
Isoelectric point | 8.76 | 5.79 | |
Sequence | HKILHRLLQD | SPGSREWFKDMLS | |
Clusters | |||
Sequence cluster | S 0 | S 1024 | |
Interface cluster | I 1 | I 1 | |
Binding cluster | B 1 | B 1 | |