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Table 4 MHCII epitope-dense proteins

From: Proteome-wide analysis of Coxiella burnetii for conserved T-cell epitopes with presentation across multiple host species

GenBank ID

Epitope Count

Gene Name

Locus Tag

Location

AAO89616.1

3

 

CBU_0049

PSE-Membrane

AAO89682.2

3

ftsI

CBU_0118

PSE-Membrane

AAO89683.2

3

 

CBU_0119

PSE-Membrane

AAO89700.1

3

murC

CBU_0136

PSE-Membrane

AAO89704.2

3

ftsA

CBU_0140

CYTOPLASM(non-PSE)

AAO89832.1

3

uvrA

CBU_0274

CYTOPLASM(non-PSE)

AAO89971.1

4

 

CBU_0419

PSE-Membrane

AAO90011.1

4

pdhA

CBU_0461

CYTOPLASM(non-PSE)

AAO90035.1

4

 

CBU_0486

CYTOPLASM(non-PSE)

AAO90130.1

4

 

CBU_0586

CYTOPLASM(non-PSE)

AAO90458.2

3

glpD

CBU_0931

CYTOPLASM(non-PSE)

AAO90735.2

3

 

CBU_1226

CYTOPLASM(non-PSE)

AAO90739.1

4

 

CBU_1230

CYTOPLASM(non-PSE)

AAO90780.1

3

 

CBU_1273

CYTOPLASM(non-PSE)

AAO90965.2

5

 

CBU_1468

PSE-Membrane

AAO91193.1

3

 

CBU_1698

CYTOPLASM(non-PSE)

AAO91233.1

4

 

CBU_1739

CYTOPLASM(non-PSE)

AAO91303.1

3

macA

CBU_1810

PSE-Lipoprotein

AAO91357.1

5

parC

CBU_1866

CYTOPLASM(non-PSE)

AAO91378.1

3

ponA

CBU_1887

PSE-Membrane

  1. The epitope count designates the number of epitopes present within a protein. NCBI defined information is present in GenBank ID, gene name, and locus tag columns. Location is interpreted from the program Inmembrane, PSE (potentially surface exposed)