Conservation of dynamic characteristics of transcriptional regulatory elements in periodic biological processes

BMC Bioinformatics

Table 2 Interaction relationships\(^*\) between core TFs and non-core that appear in the top 25 TFs as ranked by DL \(\times\) JTK\(^{\dagger }\)

*S. cerevisiae and A. thaliana interactions determined respectively by database searches of [13] and [14] and represent a range of direct and indirect evidence types, including the presence of binding motifs in regulatory regions and response to TF over-expression. M. musculus interactions determined by evidence gathered in the associated citation
\(^{\dagger }\)M. musculus non-core TFs drawn from MA dataset only, while non-core S. cerevisiae and A. thaliana TFs were drawn from the unions of each pair of analyzed datasets

ISSN: 1471-2105