Volume 11 Supplement 10

Highlights from the Sixth International Society for Computational Biology (ISCB) Student Council Symposium

Meeting abstracts

Edited by Christiaan Klijn, Thomas Abeel and Magali Michaut

Sixth International Society for Computational Biology (ISCB) Student Council Symposium. Go to conference site.

Boston, MA, USA9 July 2010

Concatenated PDF 11S10

Highlights from the 6th International Society for Computational Biology Student Council Symposium at the 18th Annual International Conference on Intelligent Systems for Molecular Biology

This meeting report gives an overview of the keynote lectures and a selection of the student oral and poster presentations at the 6th International Society for Computational Biology Student Council Symposium t...

Authors: Christiaan Klijn, Magali Michaut and Thomas Abeel

Citation: BMC Bioinformatics 2010 11(Suppl 10):I1

Content type: Introduction Published on: 7 December 2010
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Modeling protein-peptide interactions using protein fragments: fitting the pieces?

Authors: Peter Vanhee, Francois Stricher, Lies Baeten, Erik Verschueren, Luis Serrano, Frederic Rousseau and Joost Schymkowitz

Citation: BMC Bioinformatics 2010 11(Suppl 10):O1

Content type: Oral presentation Published on: 7 December 2010
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Bridging the gaps: atomic simulation of macromolecular environment brings together protein docking, interaction kinetics and the crowding effects

Authors: Xiaofan F Li, Iain H Moal and Paul A Bates

Citation: BMC Bioinformatics 2010 11(Suppl 10):O2

Content type: Oral presentation Published on: 7 December 2010
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Exploiting physical properties in protein structure alignment

Authors: Shweta Shah and Nick Sahinidis

Citation: BMC Bioinformatics 2010 11(Suppl 10):O3

Content type: Oral presentation Published on: 7 December 2010
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Structure-based kernels for the prediction of catalytic residues and their involvement in human inherited disease

Authors: Fuxiao Xin, Steven Myers, Yong Fuga Li, David N Cooper, Sean D Mooney and Predrag Radivojac

Citation: BMC Bioinformatics 2010 11(Suppl 10):O4

Content type: Oral presentation Published on: 7 December 2010
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A hidden Markov model for detecting multi-gene chromatin domains

Authors: Jessica Larson and Guocheng Yuan

Citation: BMC Bioinformatics 2010 11(Suppl 10):O5

Content type: Oral presentation Published on: 7 December 2010
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Genome wide association study of nonsynonymous Single Nucleotide Polymorphisms for seven common diseases

Authors: Praveen Surendran, Alice Stanton and Denis Shields

Citation: BMC Bioinformatics 2010 11(Suppl 10):O6

Content type: Oral presentation Published on: 7 December 2010
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is-rSNP: a novel technique for in silico regulatory SNP detection

Authors: Geoff Macintyre, James Bailey, Izhak Haviv and Adam Kowalczyk

Citation: BMC Bioinformatics 2010 11(Suppl 10):O7

Content type: Oral presentation Published on: 7 December 2010
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Next generation genome annotation with mGene.ngs

Authors: Jonas Behr, Regina Bohnert, Georg Zeller, Gabriele Schweikert, Lisa Hartmann and Gunnar Rätsch

Citation: BMC Bioinformatics 2010 11(Suppl 10):O8

Content type: Oral presentation Published on: 7 December 2010
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Analysis of the functional properties of the creatine kinase system using a multiscale ‘sloppy’ modeling approach

Authors: Hannes Hettling, Jaap Heringa and Johannes HGM van Beek

Citation: BMC Bioinformatics 2010 11(Suppl 10):O9

Content type: Oral presentation Published on: 7 December 2010
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Designing and implementing chemoinformatic approaches in TDR Targets Database: linking genes to chemical compounds in tropical disease causing pathogens

Authors: María Paula Magariños, John Overington, Santiago Carmona, Dhanasekaran Shanmugam, Maria Doyle, Stuart Ralph, Greg Crowther, Christiane Hertz-Fowler, Solomon Nwaka, Matt Berriman, David Roos, Wes Van Voorhis and Fernán Agüero

Citation: BMC Bioinformatics 2010 11(Suppl 10):O10

Content type: Oral presentation Published on: 7 December 2010
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A computational pipeline for diagnostic biomarker discovery in the human pathogen Trypanosoma cruzi

Authors: Santiago J Carmona, Paula Sartor, Maria Susana Leguizamón, Oscar Campetella and Fernán Agüero

Citation: BMC Bioinformatics 2010 11(Suppl 10):O11

Content type: Oral presentation Published on: 7 December 2010
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A bioengineering approach for rational vaccine design towards the Ebola Virus

Authors: Sophia Banton, Zvi Roth and Mirjana Pavlovic

Citation: BMC Bioinformatics 2010 11(Suppl 10):O12

Content type: Oral presentation Published on: 7 December 2010
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Human protein-protein interaction prediction

Authors: Mark D McDowall, Michelle S Scott and Geoffrey J Barton

Citation: BMC Bioinformatics 2010 11(Suppl 10):P1

Content type: Poster presentation Published on: 7 December 2010
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Highlights from the Sixth International Society for Computational Biology (ISCB) Student Council Symposium

Meeting abstracts

Highlights from the 6th International Society for Computational Biology Student Council Symposium at the 18th Annual International Conference on Intelligent Systems for Molecular Biology

Modeling protein-peptide interactions using protein fragments: fitting the pieces?

Bridging the gaps: atomic simulation of macromolecular environment brings together protein docking, interaction kinetics and the crowding effects

Exploiting physical properties in protein structure alignment

Structure-based kernels for the prediction of catalytic residues and their involvement in human inherited disease

A hidden Markov model for detecting multi-gene chromatin domains

Genome wide association study of nonsynonymous Single Nucleotide Polymorphisms for seven common diseases

is-rSNP: a novel technique for in silico regulatory SNP detection

Next generation genome annotation with mGene.ngs

Analysis of the functional properties of the creatine kinase system using a multiscale ‘sloppy’ modeling approach

Designing and implementing chemoinformatic approaches in TDR Targets Database: linking genes to chemical compounds in tropical disease causing pathogens

A computational pipeline for diagnostic biomarker discovery in the human pathogen Trypanosoma cruzi

A bioengineering approach for rational vaccine design towards the Ebola Virus

Human protein-protein interaction prediction

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