Volume 12 Supplement 11

Highlights from the Seventh International Society for Computational Biology (ISCB) Student Council Symposium 2011

Meeting abstracts

Seventh International Society for Computational Biology (ISCB) Student Council Symposium 2011. Go to conference site.

Vienna, Austria15 July 2011

Concatenated PDF 12S11

Highlights from the Student Council Symposium 2011 at the International Conference on Intelligent Systems for Molecular Biology and European Conference on Computational Biology

The Student Council (SC) of the International Society for Computational Biology (ISCB) organized their annual symposium in conjunction with the Intelligent Systems for Molecular Biology (ISMB) conference.

Authors: Priscila Grynberg, Thomas Abeel, Pedro Lopes, Geoff Macintyre and Lorena Pantano Rubiño

Citation: BMC Bioinformatics 2011 12(Suppl 11):A1

Content type: Introduction Published on: 21 November 2011
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Bacteriophage evolution drives Pseudomonas aeruginosa PAO1 biofilm diversification

Authors: Kerensa McElroy, Fabio Luciani, Janice Hui, Scott Rice and Torsten Thomas

Citation: BMC Bioinformatics 2011 12(Suppl 11):A2

Content type: Oral presentation Published on: 21 November 2011
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Efficient branch-and-bound techniques for two-locus association mapping

Authors: Karin Klotzbücher, Yasushi Kobayashi, Nino Shervashidze, Oliver Stegle, Bertram Müller-Myhsok, Detlef Weigel and Karsten Borgwardt

Citation: BMC Bioinformatics 2011 12(Suppl 11):A3

Content type: Oral presentation Published on: 21 November 2011
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Replication of epistatic DNA loci in two case-control GWAS studies using OPE algorithm

Authors: Benjamin Goudey, Qiao Wang, Dave Rawlinson, Armita Zarnegar, Eder Kikianty, John Markham, Geoff Macintyre, Gad Abraham, Linda Stern, Michael Inouye, Izhak Haviv and Adam Kowalczyk

Citation: BMC Bioinformatics 2011 12(Suppl 11):A5

Content type: Oral presentation Published on: 21 November 2011
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An integrative bioinformatic predictor of protein sub-cellular localisation in malaria

Authors: Ben J Woodcroft, Robert Radloff, Lee M Yeoh, Kristie-Lee Scanlon, Maria A Doyle, Giel G van Dooren, Geoffrey I McFadden, Christopher J Tonkin, Terence P Speed and Stuart A Ralph

Citation: BMC Bioinformatics 2011 12(Suppl 11):A6

Content type: Oral presentation Published on: 21 November 2011
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Oqtans: a Galaxy-integrated workflow for quantitative transcriptome analysis from NGS Data

Authors: Sebastian J Schultheiss, Géraldine Jean, Jonas Behr, Regina Bohnert, Philipp Drewe, Nico Görnitz, André Kahles, Pramod Mudrakarta, Vipin T Sreedharan, Georg Zeller and Gunnar Rätsch

Citation: BMC Bioinformatics 2011 12(Suppl 11):A7

Content type: Oral presentation Published on: 21 November 2011
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Profiling transcription initiation in human aged brain using deep-CAGE

Authors: Margherita Francescatto, Luba Pardo, Patrizia Rizzu, Morana Vitezic, Javier Simón-Sánchez, Hazuki Takahashi, Carsten Daub, Piero Carninci and Peter Heutink

Citation: BMC Bioinformatics 2011 12(Suppl 11):A8

Content type: Oral presentation Published on: 21 November 2011
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Computational purification of tumor gene expression data

Authors: Amit Deshwar, Gerald Quon and Quaid Morris

Citation: BMC Bioinformatics 2011 12(Suppl 11):A9

Content type: Oral presentation Published on: 21 November 2011
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The development of an open-access database for human transcriptional regulation interactions

Authors: Luiz Augusto Bovolenta, Marcio Luis Acencio and Ney Lemke

Citation: BMC Bioinformatics 2011 12(Suppl 11):A10

Content type: Oral presentation Published on: 21 November 2011
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Computational analysis of genetic network involved in pancreatic cancer in human

Authors: Mrinal Mishra and Ambuj Kumar

Citation: BMC Bioinformatics 2011 12(Suppl 11):A11

Content type: Poster presentation Published on: 21 November 2011
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Toward PWAS: discovering pathways associated with human disorders

Authors: Emre Guney and Baldo Oliva

Citation: BMC Bioinformatics 2011 12(Suppl 11):A12

Content type: Poster presentation Published on: 21 November 2011
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Spectral classification of short numerical exon and intron sequences

This research presents three new numerical representations for classifying short exon and intron sequences using discrete Fourier transform period-3 value. Based on the human genome, results indicate that the ...

Authors: Benjamin YM Kwan, Jennifer YY Kwan and Hon Keung Kwan

Citation: BMC Bioinformatics 2011 12(Suppl 11):A13

Content type: Poster presentation Published on: 21 November 2011
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Variant detection and the Autism sequencing project

Authors: Orion Buske, Misko Dzamba, Justin Foong, Lynette Lau, Marc Fiume, Christian Marshall, Susan Walker, Aparna Prasad and Michael Brudno

Citation: BMC Bioinformatics 2011 12(Suppl 11):A4

Content type: Oral presentation Published on: 21 November 2011
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Highlights from the Seventh International Society for Computational Biology (ISCB) Student Council Symposium 2011

Meeting abstracts

Highlights from the Student Council Symposium 2011 at the International Conference on Intelligent Systems for Molecular Biology and European Conference on Computational Biology

Bacteriophage evolution drives Pseudomonas aeruginosa PAO1 biofilm diversification

Efficient branch-and-bound techniques for two-locus association mapping

Replication of epistatic DNA loci in two case-control GWAS studies using OPE algorithm

An integrative bioinformatic predictor of protein sub-cellular localisation in malaria

Oqtans: a Galaxy-integrated workflow for quantitative transcriptome analysis from NGS Data

Profiling transcription initiation in human aged brain using deep-CAGE

Computational purification of tumor gene expression data

The development of an open-access database for human transcriptional regulation interactions

Computational analysis of genetic network involved in pancreatic cancer in human

Toward PWAS: discovering pathways associated with human disorders

Spectral classification of short numerical exon and intron sequences

Variant detection and the Autism sequencing project

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