Volume 12 Supplement 6

Proceedings of the First Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq)

Proceedings

Edited by Can Alkan

First Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq). Go to conference site.

Vancouver, Canada26-27 March 2011

Inferring viral quasispecies spectra from 454 pyrosequencing reads

RNA viruses infecting a host usually exist as a set of closely related sequences, referred to as quasispecies. The genomic diversity of viral quasispecies is a subject of great interest, particularly for chron...

Authors: Irina Astrovskaya, Bassam Tork, Serghei Mangul, Kelly Westbrooks, Ion Măndoiu, Peter Balfe and Alex Zelikovsky

Citation: BMC Bioinformatics 2011 12(Suppl 6):S1

Content type: Proceedings Published on: 28 July 2011
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Genotyping common and rare variation using overlapping pool sequencing

Recent advances in sequencing technologies set the stage for large, population based studies, in which the ANA or RNA of thousands of individuals will be sequenced. Currently, however, such studies are still i...

Authors: Dan He, Noah Zaitlen, Bogdan Pasaniuc, Eleazar Eskin and Eran Halperin

Citation: BMC Bioinformatics 2011 12(Suppl 6):S2

Content type: Proceedings Published on: 28 July 2011
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Assembly of non-unique insertion content using next-generation sequencing

Recent studies in genomics have highlighted the significance of sequence insertions in determining individual variation. Efforts to discover the content of these sequence insertions have been limited to short ...

Authors: Nathaniel Parrish, Farhad Hormozdiari and Eleazar Eskin

Citation: BMC Bioinformatics 2011 12(Suppl 6):S3

Content type: Proceedings Published on: 28 July 2011
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A Hidden Markov Model for Copy Number Variant prediction from whole genome resequencing data

Copy Number Variants (CNVs) are important genetic factors for studying human diseases. While high-throughput whole genome re-sequencing provides multiple lines of evidence for detecting CNVs, computational alg...

Authors: Yufeng Shen, Yiwei Gu and Itsik Pe’er

Citation: BMC Bioinformatics 2011 12(Suppl 6):S4

Content type: Proceedings Published on: 28 July 2011
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Proceedings of the First Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq)

Proceedings

Inferring viral quasispecies spectra from 454 pyrosequencing reads

Genotyping common and rare variation using overlapping pool sequencing

Assembly of non-unique insertion content using next-generation sequencing

A Hidden Markov Model for Copy Number Variant prediction from whole genome resequencing data

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