Volume 8 Supplement 8

Highlights from the Third International Society for Computational Biology (ISCB) Student Council Symposium at the Fifteenth Annual International Conference on Intelligent Systems for Molecular Biology (ISMB)

Meeting abstracts

Edited by Nils Gehlenborg, Manuel Corpas and Sarath Chandra Janga

The organizing committee would like to thank the International Biowiki Contest funded by the Korean Bioinformation Center (KOBIC) and the Institute for Systems Biology for financial contributions that made the publication of these highlights possible.

Third International Society for Computational Biology (ISCB) Student Council Symposium at the Fifteenth Annual International Conference on Intelligent Systems for Molecular Biology (ISMB). Go to conference site.

Vienna, Austria21 July 2007

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Highlights from the Third International Society for Computational Biology Student Council Symposium at the Fifteenth Annual International Conference on Intelligent Systems for Molecular Biology

In this meeting report we give an overview of the 3rd International Society for Computational Biology Student Council Symposium. Furthermore, we explain the role of the Student Council and the symposium series...

Authors: Nils Gehlenborg, Manuel Corpas and Sarath Chandra Janga

Citation: BMC Bioinformatics 2007 8(Suppl 8):I1

Content type: Meeting report Published on: 20 November 2007
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Logical modelling and analysis of the budding yeast cell cycle

Authors: Adrien Fauré, Claudine Chaouiya, Andrea Ciliberto and Denis Thieffry

Citation: BMC Bioinformatics 2007 8(Suppl 8):P1

Content type: Poster presentation Published on: 20 November 2007
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Homology modeling of a voltage-gated potassium channel (human K_v7.1)

Authors: Alexandr Goncearenco, Yasmin Karimi-Nejad and Konrad Koehler

Citation: BMC Bioinformatics 2007 8(Suppl 8):P2

Content type: Poster presentation Published on: 20 November 2007
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T2DM-GeneMiner a web resource for meta-analysis and marker identification for type 2 diabetes mellitus

Authors: Axel Rasche and Ralf Herwig

Citation: BMC Bioinformatics 2007 8(Suppl 8):P3

Content type: Poster presentation Published on: 20 November 2007
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Optimising oligonucleotide array design for ChIP-on-chip

Authors: Fiona Nielsen, Stefan Graef, Xinmin Zhang, Stefan Kurtz, Sergei Denissov, Roland Green, Ewan Birney, Paul Flicek, Martijn Huynen and Henk Stunnenberg

Citation: BMC Bioinformatics 2007 8(Suppl 8):P4

Content type: Poster presentation Published on: 20 November 2007
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Shared transcriptional correlations in seed formation and in plants response to drought

Authors: Maital Ashkenazi and Menachem Moshelion

Citation: BMC Bioinformatics 2007 8(Suppl 8):P5

Content type: Poster presentation Published on: 20 November 2007
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A procedure to decompose high resolution mass spectra

Authors: Nicola Barbarini, Paolo Magni and Riccardo Bellazzi

Citation: BMC Bioinformatics 2007 8(Suppl 8):P6

Content type: Poster presentation Published on: 20 November 2007
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A systematic strategy for the discovery of candidate genes responsible for phenotypic variation

Authors: Paul Fisher, Cornelia Hedeler, Katherine Wolstencroft, Helen Hulme, Harry Noyes, Stephen Kemp, Robert Stevens and Andrew Brass

Citation: BMC Bioinformatics 2007 8(Suppl 8):P7

Content type: Poster presentation Published on: 20 November 2007
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Multiple alignment and structure prediction of non-coding RNA sequences

Authors: Stinus Lindgreen, Paul P Gardner and Anders Krogh

Citation: BMC Bioinformatics 2007 8(Suppl 8):P8

Content type: Poster presentation Published on: 20 November 2007
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Variation of geometrical and physicochemical properties in protein binding pockets and their ligands

Authors: Abdullah Kahraman, Richard J Morris, Roman A Laskowski and Janet M Thornton

Citation: BMC Bioinformatics 2007 8(Suppl 8):S1

Content type: Oral presentation Published on: 20 November 2007
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ChIP-on-chip significance analysis reveals ubiquitous transcription factor binding

Authors: Adam A Margolin, Teresa Palomero, Adolfo A Ferrando, Andrea Califano and Gustavo Stolovitzky

Citation: BMC Bioinformatics 2007 8(Suppl 8):S2

Content type: Oral presentation Published on: 20 November 2007
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Combining dissimilarity based classifiers for cancer prediction using gene expression profiles

Authors: Ángela Blanco, Manuel Martín-Merino and Javier De Las Rivas

Citation: BMC Bioinformatics 2007 8(Suppl 8):S3

Content type: Oral presentation Published on: 20 November 2007
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Mining expression-dependent modules in the human interaction network

Authors: Elisabeth Georgii, Sabine Dietmann, Takeaki Uno, Philipp Pagel and Koji Tsuda

Citation: BMC Bioinformatics 2007 8(Suppl 8):S4

Content type: Oral presentation Published on: 20 November 2007
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Genomic scale analysis of lateral gene transfer in Apicomplexan parasites: insights into early eukaryotic evolution, host-pathogen interaction and drug target development

Authors: Lucia Peixoto and David S Roos

Citation: BMC Bioinformatics 2007 8(Suppl 8):S5

Content type: Oral presentation Published on: 20 November 2007
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Semi-supervised class discovery using quantitative phenotypes – CVD as a case study

Authors: Israel Steinfeld, Roy Navon, Diego Ardigò, Ivana Zavaroni and Zohar Yakhini

Citation: BMC Bioinformatics 2007 8(Suppl 8):S6

Content type: Oral presentation Published on: 20 November 2007
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Highlights from the Third International Society for Computational Biology (ISCB) Student Council Symposium at the Fifteenth Annual International Conference on Intelligent Systems for Molecular Biology (ISMB)

Meeting abstracts

Highlights from the Third International Society for Computational Biology Student Council Symposium at the Fifteenth Annual International Conference on Intelligent Systems for Molecular Biology

Logical modelling and analysis of the budding yeast cell cycle

Homology modeling of a voltage-gated potassium channel (human K_v7.1)

T2DM-GeneMiner a web resource for meta-analysis and marker identification for type 2 diabetes mellitus

Optimising oligonucleotide array design for ChIP-on-chip

Shared transcriptional correlations in seed formation and in plants response to drought

A procedure to decompose high resolution mass spectra

A systematic strategy for the discovery of candidate genes responsible for phenotypic variation

Multiple alignment and structure prediction of non-coding RNA sequences

Variation of geometrical and physicochemical properties in protein binding pockets and their ligands

ChIP-on-chip significance analysis reveals ubiquitous transcription factor binding

Combining dissimilarity based classifiers for cancer prediction using gene expression profiles

Mining expression-dependent modules in the human interaction network

Genomic scale analysis of lateral gene transfer in Apicomplexan parasites: insights into early eukaryotic evolution, host-pathogen interaction and drug target development

Semi-supervised class discovery using quantitative phenotypes – CVD as a case study

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