Volume 9 Supplement 10

Highlights from the Fourth International Society for Computational Biology (ISCB) Student Council Symposium

Meeting abstracts

Edited by Lucia Peixoto, Nils Gehlenborg and Sarath Chandra Janga

Fourth International Society for Computational Biology (ISCB) Student Council Symposium. Go to conference site.

Toronto, Canada18 July 2008

Concatenated PDF 9S10

Highlights from the Fourth International Society for Computational Biology Student Council Symposium at the Sixteenth Annual International Conference on Intelligent Systems for Molecular Biology

In this meeting report we give an overview of the talks and presentations from the Fourth International Society for Computational Biology (ISCB) Student Council Symposium held as part of the annual Intelligent...

Authors: Lucia Peixoto, Nils Gehlenborg and Sarath Chandra Janga

Citation: BMC Bioinformatics 2008 9(Suppl 10):I1

Content type: Meeting report Published on: 30 October 2008
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Functional module detection by functional flow pattern mining in protein interaction networks

Authors: Young-Rae Cho, Lei Shi and Aidong Zhang

Citation: BMC Bioinformatics 2008 9(Suppl 10):O1

Content type: Oral presentation Published on: 30 October 2008
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Competition between protein aggregation and protein complex formation

Authors: Sebastian Pechmann, Emmanuel D Levy, Gian G Tartaglia and Michele Vendruscolo

Citation: BMC Bioinformatics 2008 9(Suppl 10):O2

Content type: Oral presentation Published on: 30 October 2008
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Comparative analysis of non-classically secreted proteins in Botrytis cinerea and symbiotic fungus Laccaria bicolor

Authors: Preti Jain, Gopi K Podila and Maria R Davis

Citation: BMC Bioinformatics 2008 9(Suppl 10):O3

Content type: Oral presentation Published on: 30 October 2008
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Discovering relationships among dispersed repeats using spatial association rule mining

Authors: Surya Saha, Susan Bridges, Zenaida Magbanua and Daniel G Peterson

Citation: BMC Bioinformatics 2008 9(Suppl 10):O4

Content type: Oral presentation Published on: 30 October 2008
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Public microarray repository semantic annotation with ontologies employing text mining and expression profile correlation

Authors: David Ruau, Corinna Kolárik, Heinz-Theodor Mevissen, Emmanuel Müller, Ira Assent, Ralph Krieger, Thomas Seidl, Martin Hofmann-Apitius and Martin Zenke

Citation: BMC Bioinformatics 2008 9(Suppl 10):O5

Content type: Oral presentation Published on: 30 October 2008
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Ranking single nucleotide polymorphisms by potential deleterious effects

Authors: Phil Hyoun Lee and Hagit Shatkay

Citation: BMC Bioinformatics 2008 9(Suppl 10):O6

Content type: Oral presentation Published on: 30 October 2008
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Optimal spliced alignments of short sequence reads

Authors: Fabio De Bona, Stephan Ossowski, Korbinian Schneeberger and Gunnar Rätsch

Citation: BMC Bioinformatics 2008 9(Suppl 10):O7

Content type: Oral presentation Published on: 30 October 2008
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Revealing sequence variation patterns in rice with machine learning methods

Authors: Regina Bohnert, Georg Zeller, Richard M Clark, Kevin L Childs, Victor Ulat, Renee Stokowski, Dennis Ballinger, Kelly Frazer, David Cox, Richard Bruskiewich, C Robin Buell, Jan Leach, Hei Leung, Kenneth L McNally, Detlef Weigel and Gunnar Rätsch

Citation: BMC Bioinformatics 2008 9(Suppl 10):O8

Content type: Oral presentation Published on: 30 October 2008
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InteroPORC: an automated tool to predict highly conserved protein interaction networks

Authors: Magali Michaut, Samuel Kerrien, Luisa Montecchi-Palazzi, Corinne Cassier-Chauvat, Franck Chauvat, Jean-Christophe Aude, Pierre Legrain and Henning Hermjakob

Citation: BMC Bioinformatics 2008 9(Suppl 10):P1

Content type: Poster presentation Published on: 30 October 2008
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Exon level integration of proteomics and microarray data

Authors: Danny A Bitton, Michał J Okoniewski, Yvonne Connolly and Crispin J Miller

Citation: BMC Bioinformatics 2008 9(Suppl 10):P2

Content type: Poster presentation Published on: 30 October 2008
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Protein evolution driven by symmetric structural repeats

Authors: Anne-Laure Abraham, Joël Pothier and Eduardo PC Rocha

Citation: BMC Bioinformatics 2008 9(Suppl 10):P3

Content type: Poster presentation Published on: 30 October 2008
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Robust consensus computation

Authors: Tobias Rausch, Anne-Katrin Emde and Knut Reinert

Citation: BMC Bioinformatics 2008 9(Suppl 10):P4

Content type: Poster presentation Published on: 30 October 2008
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TrypanoCyc – a metabolic pathway database for Trypanosoma brucei

Authors: Bridget Chukualim, Nick Peters, Christiane Hertz Fowler and Matthew Berriman

Citation: BMC Bioinformatics 2008 9(Suppl 10):P5

Content type: Poster presentation Published on: 30 October 2008
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Quantitative systems-level determinants of drug targets

Authors: Lixia Yao and Andrey Rzhetsky

Citation: BMC Bioinformatics 2008 9(Suppl 10):P6

Content type: Poster presentation Published on: 30 October 2008
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Highlights from the Fourth International Society for Computational Biology (ISCB) Student Council Symposium

Meeting abstracts

Highlights from the Fourth International Society for Computational Biology Student Council Symposium at the Sixteenth Annual International Conference on Intelligent Systems for Molecular Biology

Functional module detection by functional flow pattern mining in protein interaction networks

Competition between protein aggregation and protein complex formation

Comparative analysis of non-classically secreted proteins in Botrytis cinerea and symbiotic fungus Laccaria bicolor

Discovering relationships among dispersed repeats using spatial association rule mining

Public microarray repository semantic annotation with ontologies employing text mining and expression profile correlation

Ranking single nucleotide polymorphisms by potential deleterious effects

Optimal spliced alignments of short sequence reads

Revealing sequence variation patterns in rice with machine learning methods

InteroPORC: an automated tool to predict highly conserved protein interaction networks

Exon level integration of proteomics and microarray data

Protein evolution driven by symmetric structural repeats

Robust consensus computation

TrypanoCyc – a metabolic pathway database for Trypanosoma brucei

Quantitative systems-level determinants of drug targets

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