Volume 9 Supplement 12

Seventh International Conference on Bioinformatics (InCoB2008)


Edited by Shoba Ranganathan, Wen-Lian Hsu, Ueng-Cheng Yang and Tin Wee Tan

Asia Pacific Bioinformatics Network (APBioNet) Seventh International Conference on Bioinformatics (InCoB2008). Go to conference site.

Taipei, Taiwan

20-23 October 2008

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  1. Introduction

    Emerging strengths in Asia Pacific bioinformatics

    The 2008 annual conference of the Asia Pacific Bioinformatics Network (APBioNet), Asia's oldest bioinformatics organisation set up in 1998, was organized as the 7th International Conference on Bioinformatics (InC...

    Shoba Ranganathan, Wen-Lian Hsu, Ueng-Cheng Yang and Tin Wee Tan

    BMC Bioinformatics 2008 9(Suppl 12):S1

    Published on: 12 December 2008

  2. Research

    Finding microRNA regulatory modules in human genome using rule induction

    MicroRNAs (miRNAs) are a class of small non-coding RNA molecules (20–24 nt), which are believed to participate in repression of gene expression. They play important roles in several biological processes (e.g. ...

    Dang Hung Tran, Kenji Satou and Tu Bao Ho

    BMC Bioinformatics 2008 9(Suppl 12):S5

    Published on: 12 December 2008

  3. Research

    VarDetect: a nucleotide sequence variation exploratory tool

    Single nucleotide polymorphisms (SNPs) are the most commonly studied units of genetic variation. The discovery of such variation may help to identify causative gene mutations in monogenic diseases and SNPs ass...

    Chumpol Ngamphiw, Supasak Kulawonganunchai, Anunchai Assawamakin, Ekachai Jenwitheesuk and Sissades Tongsima

    BMC Bioinformatics 2008 9(Suppl 12):S9

    Published on: 12 December 2008

  4. Research

    Functional analysis of novel SNPs and mutations in human and mouse genomes

    With the flood of information generated by the new generation of sequencing technologies, more efficient bioinformatics tools are needed for in-depth impact analysis of novel genomic variations. FANS (Function...

    Chuan-Kun Liu, Yan-Hau Chen, Cheng-Yang Tang, Shu-Chuan Chang, Yi-Jung Lin, Ming-Fang Tsai, Yuan-Tsong Chen and Adam Yao

    BMC Bioinformatics 2008 9(Suppl 12):S10

    Published on: 12 December 2008

  5. Research

    Ortholog-based protein-protein interaction prediction and its application to inter-species interactions

    The rapid growth of protein-protein interaction (PPI) data has led to the emergence of PPI network analysis. Despite advances in high-throughput techniques, the interactomes of several model organisms are stil...

    Sheng-An Lee, Cheng-hsiung Chan, Chi-Hung Tsai, Jin-Mei Lai, Feng-Sheng Wang, Cheng-Yan Kao and Chi-Ying F Huang

    BMC Bioinformatics 2008 9(Suppl 12):S11

    Published on: 12 December 2008

  6. Research

    Molecular docking studies of dithionitrobenzoic acid and its related compounds to protein disulfide isomerase: computational screening of inhibitors to HIV-1 entry

    Entry of HIV-1 into human lymphoid requires activities of viral envelope glycoproteins gp120 and gp41, and two host-cell proteins, the primary receptor CD4 and a chemokine co-receptor. In addition, a third cel...

    Uthaman Gowthaman, Mannu Jayakanthan and Durai Sundar

    BMC Bioinformatics 2008 9(Suppl 12):S14

    Published on: 12 December 2008

  7. Research

    Predicted mouse peroxisome-targeted proteins and their actual subcellular locations

    The import of most intraperoxisomal proteins is mediated by peroxisome targeting signals at their C-termini (PTS1) or N-terminal regions (PTS2). Both signals have been integrated in subcellular location predic...

    Yumi Mizuno, Igor V Kurochkin, Marlis Herberth, Yasushi Okazaki and Christian Schönbach

    BMC Bioinformatics 2008 9(Suppl 12):S16

    Published on: 12 December 2008

  8. Research

    Dynamic sensitivity analysis of biological systems

    A mathematical model to understand, predict, control, or even design a real biological system is a central theme in systems biology. A dynamic biological system is always modeled as a nonlinear ordinary differ...

    Wu Hsiung Wu, Feng Sheng Wang and Maw Shang Chang

    BMC Bioinformatics 2008 9(Suppl 12):S17

    Published on: 12 December 2008

  9. Research

    Semi-automatic conversion of BioProp semantic annotation to PASBio annotation

    Semantic role labeling (SRL) is an important text analysis technique. In SRL, sentences are represented by one or more predicate-argument structures (PAS). Each PAS is composed of a predicate (verb) and severa...

    Richard Tzong-Han Tsai, Hong-Jie Dai, Chi-Hsin Huang and Wen-Lian Hsu

    BMC Bioinformatics 2008 9(Suppl 12):S18

    Published on: 12 December 2008

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