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Volume 15 Supplement 11

Proceedings of the 11th Annual MCBIOS Conference

Proceedings

Edited by Jonathan D Wren, Mikhail G Dozmorov, Dennis Burian, Andy Perkins, Chaoyang Zhang, Peter Hoyt and Rakesh Kaundal

Publication of this supplement has not been supported by sponsorship. Information about the source of funding for publication charges can be found in the individual articles. The peer review process was oversee by the Supplement Editors in accordance with BioMed Central's peer review guidelines for supplements. The Supplement Editors declare that they have no competing interests.

11th Annual MCBIOS Conference. Go to conference site.

Stillwater, OK, USA6-8 March 2014

  3. Next Generation Sequencing (NGS) methods are rapidly providing remarkable advances in our ability to study the molecular profiles of human cancers. However, the scientific discovery offered by NGS also include...

    Authors: Michael A Bauer, Shweta S Chavan, Erich A Peterson, Christoph J Heuck and Donald J Johann Jr

    Citation: BMC Bioinformatics 2014 15(Suppl 11):S3

    Content type: Proceedings

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  4. Endocrine disrupting chemicals (EDCs) are exogenous compounds that interfere with the endocrine system of vertebrates, often through direct or indirect interactions with nuclear receptor proteins. Estrogen rec...

    Authors: Hui Wen Ng, Wenqian Zhang, Mao Shu, Heng Luo, Weigong Ge, Roger Perkins, Weida Tong and Huixiao Hong

    Citation: BMC Bioinformatics 2014 15(Suppl 11):S4

    Content type: Proceedings

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  5. Extracted ion chromatogram (EIC) extraction and chromatographic peak detection are two important processing procedures in liquid chromatography/mass spectrometry (LC/MS)-based metabolomics data analysis. Most ...

    Authors: Wenchao Zhang and Patrick X Zhao

    Citation: BMC Bioinformatics 2014 15(Suppl 11):S5

    Content type: Proceedings

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  6. Due to a significant decline in the costs associated with next-generation sequencing, it has become possible to decipher the genetic architecture of a population by sequencing a large number of individuals to ...

    Authors: Wenqian Zhang, Joe Meehan, Zhenqiang Su, Hui Wen Ng, Mao Shu, Heng Luo, Weigong Ge, Roger Perkins, Weida Tong and Huixiao Hong

    Citation: BMC Bioinformatics 2014 15(Suppl 11):S6

    Content type: Proceedings

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  7. As the amount of scientific data grows, peer-reviewed Scientific Data Analysis Resources (SDARs) such as published software programs, databases and web servers have had a strong impact on the productivity of s...

    Authors: Jason Hennessey, Constantin Georgescu and Jonathan D Wren

    Citation: BMC Bioinformatics 2014 15(Suppl 11):S7

    Content type: Proceedings

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  9. Tumors are heterogeneous in composition. They are composed of cancer cells proper, along with stromal elements that collectively form a microenvironment, all of which are necessary to nurture the malignant pro...

    Authors: Erich A Peterson, Shweta S Chavan, Michael A Bauer, Christoph J Heuck and Donald J Johann Jr

    Citation: BMC Bioinformatics 2014 15(Suppl 11):S9

    Content type: Proceedings

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  10. While next-generation sequencing (NGS) technologies are rapidly advancing, an area that lags behind is the development of efficient and user-friendly tools for preliminary analysis of massive NGS data. As an e...

    Authors: Yan Peng, Andrew S Maxwell, Natalie D Barker, Jennifer G Laird, Alan J Kennedy, Nan Wang, Chaoyang Zhang and Ping Gong

    Citation: BMC Bioinformatics 2014 15(Suppl 11):S10

    Content type: Proceedings

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  12. Liquid chromatography coupled to mass spectrometry (LCMS) has become a widely used technique in metabolomics research for differential profiling, the broad screening of biomolecular constituents across multipl...

    Authors: Stephen C Grace, Stephen Embry and Heng Luo

    Citation: BMC Bioinformatics 2014 15(Suppl 11):S12

    Content type: Proceedings

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  13. Every year pathogenic organisms cause billions of dollars' worth damage to crops and livestock. In agriculture, study of plant-microbe interactions is demanding a special attention to develop management strate...

    Authors: Sitanshu S Sahu, Tyler Weirick and Rakesh Kaundal

    Citation: BMC Bioinformatics 2014 15(Suppl 11):S13

    Content type: Proceedings

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  14. Recognizing the correct structural fold among known template protein structures for a target protein (i.e. fold recognition) is essential for template-based protein structure modeling. Since the fold recogniti...

    Authors: Taeho Jo and Jianlin Cheng

    Citation: BMC Bioinformatics 2014 15(Suppl 11):S14

    Content type: Proceedings

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  15. Laccases (E.C. 1.10.3.2) are multi-copper oxidases that have gained importance in many industries such as biofuels, pulp production, textile dye bleaching, bioremediation, and food production. Their usefulness...

    Authors: Tyler Weirick, Sitanshu S Sahu, Ramamurthy Mahalingam and Rakesh Kaundal

    Citation: BMC Bioinformatics 2014 15(Suppl 11):S15

    Content type: Proceedings

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  16. Chemical cross-linking is used for protein-protein contacts mapping and for structural analysis. One of the difficulties in cross-linking studies is the analysis of mass-spectrometry data and the assignment of...

    Authors: Mihir Jaiswal, Nathaniel Mark Crabtree, Michael A Bauer, Roger Hall, Kevin D Raney and Boris L Zybailov

    Citation: BMC Bioinformatics 2014 15(Suppl 11):S16

    Content type: Proceedings

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