Volume 16 Supplement 2

Highlights from the Tenth International Society for Computational Biology (ISCB) Student Council Symposium 2014

Meeting abstracts

The publication charges for this supplement were funded by the conference. A list of conference sponsors can be found on the conference website.

Tenth International Society for Computational Biology (ISCB) Student Council Symposium 2014. Go to conference site.

Boston, MA, USA11 July 2014

Concatenated PDF 16S2

Highlights from the tenth ISCB Student Council Symposium 2014

This report summarizes the scientific content and activities of the annual symposium organized by the Student Council of the International Society for Computational Biology (ISCB), held in conjunction with the...

Authors: Farzana Rahman, Katie Wilkins, Annika Jacobsen, Alexander Junge, Esmeralda Vicedo, Dan DeBlasio, Anupama Jigisha and Tomás Di Domenico

Citation: BMC Bioinformatics 2015 16(Suppl 2):A1

Content type: Introduction Published on: 28 January 2015
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COSMOS: cloud enabled NGS analysis

Authors: Yassine Souilmi, Jae-Yoon Jung, Alex Lancaster, Erik Gafni, Saaid Amzazi, Hassan Ghazal, Dennis Wall and Peter Tonellato

Citation: BMC Bioinformatics 2015 16(Suppl 2):A2

Content type: Meeting abstract Published on: 28 January 2015
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Parameter advising for multiple sequence alignment

Authors: Dan DeBlasio and John Kececioglu

Citation: BMC Bioinformatics 2015 16(Suppl 2):A3

Content type: Meeting abstract Published on: 28 January 2015
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Statistical elimination of spectral features with large between-run variation enhances quantitative protein-level conclusions in experiments with data-independent spectral acquisition

Authors: Lin-Yang Cheng, Yansheng Liu, Ching-Yun Chang, Hannes Röst, Ruedi Aebersold and Olga Vitek

Citation: BMC Bioinformatics 2015 16(Suppl 2):A4

Content type: Meeting abstract Published on: 28 January 2015
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Genotyping microsatellites in next-generation sequencing data

Authors: Harriet Dashnow, Susan Tan, Debjani Das, Simon Easteal and Alicia Oshlack

Citation: BMC Bioinformatics 2015 16(Suppl 2):A5

Content type: Meeting abstract Published on: 28 January 2015
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Protein translational control and its contribution to oncogenesis revealed by computational methods

Authors: Yi Zhong, Phillip Drewe, Andrew L Wolfe, Kamini Singh, Hans-Guido Wendel and Gunnar Rätsch

Citation: BMC Bioinformatics 2015 16(Suppl 2):A6

Content type: Meeting abstract Published on: 28 January 2015
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Tetranucleotide usage in mycobacteriophage genomes: alignment-free methods to cluster phage and infer evolutionary relationships

Authors: Benjamin Siranosian, Emma Herold, Edward Williams, Chen Ye and Christopher de Graffenried

Citation: BMC Bioinformatics 2015 16(Suppl 2):A7

Content type: Meeting abstract Published on: 28 January 2015
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Normalizing alternate representations of large sequence variants across multiple bacterial genomes

Authors: Alex Salazar, Ashlee Earl, Christopher Desjardins and Thomas Abeel

Citation: BMC Bioinformatics 2015 16(Suppl 2):A8

Content type: Meeting abstract Published on: 28 January 2015
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The road to linking genomics and proteomics of pathogenic bacteria: from binary protein complexes to interaction pathways

Authors: Sarah L Keasey, Mohan Natesan, Christine Pugh, Teddy Kamata, Stefan Wuchty and Robert G Ulrich

Citation: BMC Bioinformatics 2015 16(Suppl 2):A9

Content type: Meeting abstract Published on: 28 January 2015
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NGS-Logistics: data infrastructure for efficient analysis of NGS sequence variants across multiple centers

Authors: Amin Ardeshirdavani, Erika Souche, Luc Dehaspe, Jeroen Van Houdt, Joris Robert Vermeesch and Yves Moreau

Citation: BMC Bioinformatics 2015 16(Suppl 2):A10

Content type: Meeting abstract Published on: 28 January 2015
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Highlights from the Tenth International Society for Computational Biology (ISCB) Student Council Symposium 2014

Meeting abstracts

Highlights from the tenth ISCB Student Council Symposium 2014

COSMOS: cloud enabled NGS analysis

Parameter advising for multiple sequence alignment

Statistical elimination of spectral features with large between-run variation enhances quantitative protein-level conclusions in experiments with data-independent spectral acquisition

Genotyping microsatellites in next-generation sequencing data

Protein translational control and its contribution to oncogenesis revealed by computational methods

Tetranucleotide usage in mycobacteriophage genomes: alignment-free methods to cluster phage and infer evolutionary relationships

Normalizing alternate representations of large sequence variants across multiple bacterial genomes

The road to linking genomics and proteomics of pathogenic bacteria: from binary protein complexes to interaction pathways

NGS-Logistics: data infrastructure for efficient analysis of NGS sequence variants across multiple centers

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