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Volume 17 Supplement 18

Proceedings of X-meeting 2015: 11th International Conference of the AB3C + Brazilian Symposium on Bioinformatics: bioinformatics

Research

Publication of this supplement has not been supported by sponsorship. Information about the source of funding for publication charges can be found in the individual articles. The articles have undergone the journal's standard peer review process for supplements. The Supplement Editors declare that they have no competing interests.

São Paulo, Brazil3-6 November 2015

Conference website 

Edited by Sergio Campos, Ronnie Alves, Marcelo Brandão, Ney Lemke and André Fujita

Related articles from X-meeting 2015 have been published as a supplement in BMC Genomics

  1. Azopirillum brasilense is a plant-growth promoting nitrogen-fixing bacteria that is used as bio-fertilizer in agriculture. Since nitrogen fixation has a high-energy demand, the reducti...

    Authors: Elisa Terumi Rubel, Roberto Tadeu Raittz, Nilson Antonio da Rocha Coimbra, Michelly Alves Coutinho Gehlen and Fábio de Oliveira Pedrosa
    Citation: BMC Bioinformatics 2016 17(Suppl 18):455
  2. Tospovirus is a plant-infecting genus within the family Bunyaviridae, which also includes four animal-infecting genera: Hantavirus, Nairovirus, Phlebovirus and Orthobunyavirus. Compared to these members, the s...

    Authors: Rayane Nunes Lima, Muhammad Faheem, João Alexandre Ribeiro Gonçalves Barbosa, Marcelo Depólo Polêto, Hugo Verli, Fernando Lucas Melo and Renato Oliveira Resende
    Citation: BMC Bioinformatics 2016 17(Suppl 18):489
  3. The median of k≥3 genomes was originally defined to find a compromise genome indicative of a common ancestor. However, in gene order comparisons, the usual definitions based on minimizing the sum of distances to ...

    Authors: Caroline Anne Larlee, Alex Brandts and David Sankoff
    Citation: BMC Bioinformatics 2016 17(Suppl 18):473
  4. This work presents a machine learning strategy to increase sensitivity in tandem mass spectrometry (MS/MS) data analysis for peptide/protein identification. MS/MS yields thousands of spectra in a single run wh...

    Authors: Fabio Ribeiro Cerqueira, Adilson Mendes Ricardo, Alcione de Paiva Oliveira, Armin Graber and Christian Baumgartner
    Citation: BMC Bioinformatics 2016 17(Suppl 18):472
  5. Fusarium graminearum (FG) is one of the major cereal infecting pathogens causing high economic losses worldwide and resulting in adverse effects on human and animal health. Therefore, ...

    Authors: Emmanuel Bresso, Roberto Togawa, Kim Hammond-Kosack, Martin Urban, Bernard Maigret and Natalia Florencio Martins
    Citation: BMC Bioinformatics 2016 17(Suppl 18):463
  6. MicroRNAs (miRNAs) are key gene expression regulators in plants and animals. Therefore, miRNAs are involved in several biological processes, making the study of these molecules one of the most relevant topics ...

    Authors: Yuri Bento Marques, Alcione de Paiva Oliveira, Ana Tereza Ribeiro Vasconcelos and Fabio Ribeiro Cerqueira
    Citation: BMC Bioinformatics 2016 17(Suppl 18):474

    The Erratum to this article has been published in BMC Bioinformatics 2017 18:113

  7. The evolution of Next-Generation Sequencing (NGS) has considerably reduced the cost per sequenced-base, allowing a significant rise of sequencing projects, mainly in prokaryotes. However, the range of availabl...

    Authors: Diego C. B. Mariano, Felipe L. Pereira, Edgar L. Aguiar, Letícia C. Oliveira, Leandro Benevides, Luís C. Guimarães, Edson L. Folador, Thiago J. Sousa, Preetam Ghosh, Debmalya Barh, Henrique C. P. Figueiredo, Artur Silva, Rommel T. J. Ramos and Vasco A. C. Azevedo
    Citation: BMC Bioinformatics 2016 17(Suppl 18):456
  8. snoReport uses RNA secondary structure prediction combined with machine learning as the basis to identify the two main classes of small nucleolar RNAs, the box H/ACA snoRNAs and the bo...

    Authors: João Victor de Araujo Oliveira, Fabrizio Costa, Rolf Backofen, Peter Florian Stadler, Maria Emília Machado Telles Walter and Jana Hertel
    Citation: BMC Bioinformatics 2016 17(Suppl 18):464

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