Skip to content

Advertisement

BMC Bioinformatics

Articles

Sort by
Previous Page Page 2 of 346 Next Page
  1. Content type: Research

    Functional modules in biological networks consist of numerous biomolecules and their complicated interactions. Recent studies have shown that biomolecules in a functional module tend to have similar interactio...

    Authors: Hyundoo Jeong, Xiaoning Qian and Byung-Jun Yoon

    Citation: BMC Bioinformatics 2017 18(Suppl 14):500

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 14

  2. Content type: Research

    Drug-drug interaction extraction (DDI) needs assistance from automated methods to address the explosively increasing biomedical texts. In recent years, deep neural network based models have been developed to a...

    Authors: Wei Wang, Xi Yang, Canqun Yang, Xiaowei Guo, Xiang Zhang and Chengkun Wu

    Citation: BMC Bioinformatics 2017 18(Suppl 16):578

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  3. Content type: Research

    Zika virus (ZIKV) is an emerging human pathogen. Since its arrival in the Western hemisphere, from Africa via Asia, it has become a serious threat to pregnant women, causing microcephaly and other neuropathies...

    Authors: Se-Ran Jun, Trudy M. Wassenaar, Visanu Wanchai, Preecha Patumcharoenpol, Intawat Nookaew and David W. Ussery

    Citation: BMC Bioinformatics 2017 18(Suppl 14):471

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 14

  4. Content type: Methodology Article

    Prediction in high dimensional settings is difficult due to the large number of variables relative to the sample size. We demonstrate how auxiliary ‘co-data’ can be used to improve the performance of a Random ...

    Authors: Dennis E. te Beest, Steven W. Mes, Saskia M. Wilting, Ruud H. Brakenhoff and Mark A. van de Wiel

    Citation: BMC Bioinformatics 2017 18:584

    Published on:

  5. Content type: Research

    In current statistical methods for calling differentially expressed genes in RNA-Seq experiments, the assumption is that an adjusted observed gene count represents an unknown true gene count. This adjustment u...

    Authors: Joel Z. B. Low, Tsung Fei Khang and Martti T. Tammi

    Citation: BMC Bioinformatics 2017 18(Suppl 16):575

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  6. Content type: Research

    (-)-Balanol is an ATP mimic that inhibits protein kinase C (PKC) isozymes and cAMP-dependent protein kinase (PKA) with limited selectivity. While PKA is a tumour promoter, PKC isozymes act as tumour promoters ...

    Authors: Ari Hardianto, Muhammad Yusuf, Fei Liu and Shoba Ranganathan

    Citation: BMC Bioinformatics 2017 18(Suppl 16):572

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  7. Content type: Research

    In metagenomics, the separation of nucleotide sequences belonging to an individual or closely matched populations is termed binning. Binning helps the evaluation of underlying microbial population structure as...

    Authors: Damayanthi Herath, Sen-Lin Tang, Kshitij Tandon, David Ackland and Saman Kumara Halgamuge

    Citation: BMC Bioinformatics 2017 18(Suppl 16):571

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  8. Content type: Research

    Endometrial cancers (ECs) are one of the most common types of malignant tumor in females. Substantial efforts had been made to identify significantly mutated genes (SMGs) in ECs and use them as biomarkers for ...

    Authors: Keqin Liu, Li He, Zhichao Liu, Junmei Xu, Yuan Liu, Qifan Kuang, Zhining Wen and Menglong Li

    Citation: BMC Bioinformatics 2017 18(Suppl 14):472

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 14

  9. Content type: Research

    Direct prediction of the three-dimensional (3D) structures of proteins from one-dimensional (1D) sequences is a challenging problem. Significant structural characteristics such as solvent accessibility and con...

    Authors: Lei Deng, Chao Fan and Zhiwen Zeng

    Citation: BMC Bioinformatics 2017 18(Suppl 16):569

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  10. Content type: Research

    Common spatial pattern (CSP) has been an effective technique for feature extraction in electroencephalography (EEG) based brain computer interfaces (BCIs). However, motor imagery EEG signal feature extraction ...

    Authors: Shiu Kumar, Alok Sharma and Tatsuhiko Tsunoda

    Citation: BMC Bioinformatics 2017 18(Suppl 16):545

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  11. Content type: Research

    Viruses of the flaviviridae family are responsible for some of the major infectious viral diseases around the world and there is an urgent need for drug development for these diseases. Most of the virtual screeni...

    Authors: Nikhil Pathak, Mei-Ling Lai, Wen-Yu Chen, Betty-Wu Hsieh, Guann-Yi Yu and Jinn-Moon Yang

    Citation: BMC Bioinformatics 2017 18(Suppl 16):548

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  12. Content type: Research

    Much effort has been devoted to the discovery of specific mechanisms between drugs and single targets to date. However, as biological systems maintain homeostasis at the level of functional networks robustly c...

    Authors: Zongliang Yue, Itika Arora, Eric Y. Zhang, Vincent Laufer, S. Louis Bridges and Jake Y. Chen

    Citation: BMC Bioinformatics 2017 18(Suppl 14):532

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 14

  13. Content type: Research

    Multi-label classification of data remains to be a challenging problem. Because of the complexity of the data, it is sometimes difficult to infer information about classes that are not mutually exclusive. For ...

    Authors: Andrew Maxwell, Runzhi Li, Bei Yang, Heng Weng, Aihua Ou, Huixiao Hong, Zhaoxian Zhou, Ping Gong and Chaoyang Zhang

    Citation: BMC Bioinformatics 2017 18(Suppl 14):523

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 14

  14. Content type: Research

    The identification of target molecules is important for understanding the mechanism of “target deconvolution” in phenotypic screening and “polypharmacology” of drugs. Because conventional methods of identifyin...

    Authors: Kyoungyeul Lee, Minho Lee and Dongsup Kim

    Citation: BMC Bioinformatics 2017 18(Suppl 16):567

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  15. Content type: Research

    In recent years, biological interaction networks have become the basis of some essential study and achieved success in many applications. Some typical networks such as protein-protein interaction networks have...

    Authors: Zhen Tian, Maozu Guo, Chunyu Wang, Xiaoyan Liu and Shiming Wang

    Citation: BMC Bioinformatics 2017 18(Suppl 16):550

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  16. Content type: Research

    Human papillomavirus infection is a global social burden that, every year, leads to thousands new diagnosis of cancer. The introduction of a protocol of immunization, with Gardasil and Cervarix vaccines, has r...

    Authors: Marzio Pennisi, Giulia Russo, Silvia Ravalli and Francesco Pappalardo

    Citation: BMC Bioinformatics 2017 18(Suppl 16):544

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  17. Content type: Research

    Phenotypic classification is problematic because small samples are ubiquitous; and, for these, use of prior knowledge is critical. If knowledge concerning the feature-label distribution – for instance, genetic...

    Authors: Shahin Boluki, Mohammad Shahrokh Esfahani, Xiaoning Qian and Edward R Dougherty

    Citation: BMC Bioinformatics 2017 18(Suppl 14):552

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 14

  18. Content type: Research

    The dramatic development of DNA sequencing technology is generating real big data, craving for more storage and bandwidth. To speed up data sharing and bring data to computing resource faster and cheaper, it i...

    Authors: Yuting Xing, Gen Li, Zhenguo Wang, Bolun Feng, Zhuo Song and Chengkun Wu

    Citation: BMC Bioinformatics 2017 18(Suppl 16):549

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  19. Content type: Research

    Plankton, including phytoplankton and zooplankton, are the main source of food for organisms in the ocean and form the base of marine food chain. As the fundamental components of marine ecosystems, plankton is...

    Authors: Haiyong Zheng, Ruchen Wang, Zhibin Yu, Nan Wang, Zhaorui Gu and Bing Zheng

    Citation: BMC Bioinformatics 2017 18(Suppl 16):570

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  20. Content type: Research

    Clustering methods are becoming widely utilized in biomedical research where the volume and complexity of data is rapidly increasing. Unsupervised clustering of patient information can reveal distinct phenotyp...

    Authors: Alok Sharma, Piotr J. Kamola and Tatsuhiko Tsunoda

    Citation: BMC Bioinformatics 2017 18(Suppl 16):547

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  21. Content type: Methodology article

    Genotyping-by-sequencing (GBS), a method to identify genetic variants and quickly genotype samples, reduces genome complexity by using restriction enzymes to divide the genome into fragments whose ends are seq...

    Authors: Daniel P. Wickland, Gopal Battu, Karen A. Hudson, Brian W. Diers and Matthew E. Hudson

    Citation: BMC Bioinformatics 2017 18:586

    Published on:

  22. Content type: Research

    Differential co-expression (DCX) signifies change in degree of co-expression of a set of genes among different biological conditions. It has been used to identify differential co-expression networks or interac...

    Authors: Herty Liany, Jagath C. Rajapakse and R. Krishna Murthy Karuturi

    Citation: BMC Bioinformatics 2017 18(Suppl 16):576

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  23. Content type: Research

    Pathogen detection in clinical samples based on 16S metagenomic sequencing technology in microbiology laboratories is an important strategy for clinical diagnosis, public health surveillance, and investigation...

    Authors: Jiaojiao Miao, Na Han, Yujun Qiang, Tingting Zhang, Xiuwen Li and Wen Zhang

    Citation: BMC Bioinformatics 2017 18(Suppl 16):568

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  24. Content type: Research

    RNA molecules have been known to play a variety of significant roles in cells. In principle, the functions of RNAs are largely determined by their three-dimensional (3D) structures. As more and more RNA 3D str...

    Authors: Ching-Yu Yen, Jian-Cheng Lin, Kun-Tze Chen and Chin Lung Lu

    Citation: BMC Bioinformatics 2017 18(Suppl 16):574

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 16

  25. Content type: Database

    It is well-known that genome sequencing technologies are becoming significantly cheaper and faster. As a result of this, the exponential growth in sequencing data in public databases allows us to explore ever ...

    Authors: Visanu Wanchai, Preecha Patumcharoenpol, Intawat Nookaew and David Ussery

    Citation: BMC Bioinformatics 2017 18(Suppl 14):483

    Published on:

    This article is part of a Supplement: Volume 18 Supplement 14

Previous Page Page 2 of 346 Next Page

Featured videos

View featured videos from across the BMC-series journals

2016 Journal Metrics

  • Citation Impact
    2.448 - 2-year Impact Factor
    3.450 - 5-year Impact Factor
    0.946 - Source Normalized Impact per Paper (SNIP)
    1.467 - SCImago Journal Rank (SJR)

    Usage 
    3784657 downloads
    1405 Usage Factor


    Social Media Impact
    816 mentions

Advertisement